Workshop - Image analysis beyond borders

 

Welcome to a workshop organized by HALOS-QIM-CIPA-CSSB!

Program

10.30-10.50 Welcome - Kajsa M. Paulsson (introducing HALOS), Anders Sjöström (introducing CIPA), Carolin Seuring (introducing CSSB), Monica Emerson (introducing QIM)

10.50-11.10 Imaging in Life Science - Tomas Lundqvist, Sprint Bioscience

11.10-11.30 Image analysis in life science – a personal view with examples - Daniel Wüstner, University of Southern Denmark

11.30-11.50 Educational activities for training the next generation of tomography researchers and the need of access to computing clusters - Emanuel Larsson, Lund University)

11.50-12.10 Planning for multimodal imaging experiments - Oxana Klementieva, Lund University

12.10-12.20  A new initiative to connect Life Science with large scale facilities - Elin Jonsson, InfraLife/MAX IV

12.20-12.30 Poster set up and introduction to Remo - Matthias Kreuzeder, DESY

12.30-13.00 Lunch 

13.00-13.20 "CryoEM-tomography" - Ulrike Laugks, Universität Hamburg

13.20-13.40 "Correlative Light and Electron Microscopy" (CLEM)  - Josie Ferreira, Universität Hamburg

13.40-14.00 Multi-scale Phase Contrast X-ray Tomography of Biological Tissues - Tim Salditt, Georg-August Universität Göttingen, Institut for X-Ray Physics

14.00-14.20 Analysis of Volumetric Images using Geometric Models - Vedrana Andersen Dahl, Technical University of Denmark

14.20-14.40 Imaging of Covid-19 Infected Heart Tissue - Patric Møller Jensen, Technical University of Denmark and Marius Reichardt, Göttingen University

14.40-15.00 Leg stretch with coffee/tea (please feel free to have coffee/tea in the Remo virtual space)

15.00-15.45 Themed break-out rooms in Zoom with industry representatives and moderators

15.45-16.00 Discussion, summary and concluding remarks

16.00-17.00 Drinks of your own choice (and supply), mingle and poster viewing in Remo.

Registration

https://lu-se.zoom.us/meeting/register/u5cude6orz8rH90MdNA30naEnMFz_aLp…

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Poster session

This time the HALOS poster session will held as digital event. Here are some guidelines for the conference virtual REMO space where you can gather with industry, other participants, and look at stunning posters (Friday 12 pm - 5 pm)!

 … for the poster session - present a scientific poster, a beautiful image, highlight a course package or show a poster of your company

Apart from preparing the poster - all you need to do is to please register your poster here: https://forms.gle/ZY6qBApo9fjxZEbQA - Your poster will be displayed in REMO - our virtual gathering space during the meeting. You will be allocated your own table, and 6 other participants can join your table at the same time to have nice discussions. Every participant can set-up a virtual poster on Friday 18.6.2021 - 12 pm - REMO virtual space - https://live.remo.co/e/halos-workshop-image-analysis-be .  

… as a participant: You want to participate and talk to the poster presenters, speakers or industry representatives?

To enjoy the Virtual poster session and start chatting with any participant, register in REMO https://live.remo.co/e/halos-workshop-image-analysis-be with your name and a password. Please allow the usage of camera and microphone in your browser. The session will open only on June 18th at 12 pm. You will be allocated randomly to a table and look at that poster. Double click on another table to move. On the left hand side of your screen, you will find the list of floors. You will find tables with speaker names and poster presenters on both floors - and you can see all other participants in the chat.

You want to talk to another participant? Search for this person in the Chat function and start a private chat. You may also meet at one of the empty tables and have a chat via the video conference.
More information on how to use REMO, please visit: https://youtu.be/P01JxUBNU2Y
If you want to check if your system is ready for REMO, please visit https://geartest.remo.co/

….As a virtual poster presenter 

We strongly advise you not to use a standard A0 portrait layout. We rather suggest to use a landscape format in 16:9 or 16:10 for your poster. There will be a short meeting on Thursday, 17.6.2021 - 4 pm to show you how to set-up your poster.

Join Zoom Meeting

https://uni-hamburg.zoom.us/j/63385496959?pwd=MG0xa3R0V2tJYTBwY2p3RFM3Zyt4QT09

Meeting ID: 633 8549 6959

Passcode: Halos2021

You need some input in setting up scientific posters in a new way? Please visit:
https://www.youtube.com/watch?v=1RwJbhkCA58 or https://www.youtube.com/watch?v=SYk29tnxASs

There are two possibilities to present your poster online.  (Please note: There will be no upload of your poster to the conference website)

1) Via “Share Screen

Please open your file on your desktop and click on the share screen button on your tile list.
Please note that people may only see your poster, as long as you share your screen.

2) Using the whiteboard function

You may want to use the whiteboard in order to present your work. There you can upload your poster as well as further documents.
The whiteboard is linked to your table and not to your presence, which means your uploaded poster will stay until the end of the meeting.
Participants can individually join in and comment to your poster and can even leave a message if you are not present.
For further information on how to use the whiteboard please visit: https://www.youtube.com/watch?v=FLekgUWya2k&feature=emb_logo

…. for industry
Industry representatives can be allocated their own table accessible to all participants.
We need a logo, a short video link, and their website information from you!

… REMO Support
For further information and support during the event please send an email to Matthias [dot] Kreuzeder [at] desy [dot] de () or  katharina [dot] kucza [at] desy [dot] de ().

… Data protection | Privacy policy
Referring Remo, please note that Remo will be the controller and you are entering directly into a contract with Remo.co<http://Remo.co>. The REMO privacy policy and data protection rules can be found here https://remo.co/privacy-policy/. It is your personal decision to enter a REMO session or not. The room will be deleted after the conference has finished.